CDS
| Accession Number | TCMCG057C37469 |
| gbkey | CDS |
| Protein Id | XP_018438669.1 |
| Location | complement(join(50719050..50719268,50719357..50719585,50719676..50719965,50720188..50720634)) |
| Gene | LOC108811114 |
| GeneID | 108811114 |
| Organism | Raphanus sativus |
Protein
| Length | 394aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018583167.1 |
| Definition | PREDICTED: polygalacturonase [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | Pectate lyase superfamily protein |
| KEGG_TC | - |
| KEGG_Module |
M00081
[VIEW IN KEGG] |
| KEGG_Reaction |
R01982
[VIEW IN KEGG] R02360 [VIEW IN KEGG] |
| KEGG_rclass |
RC00049
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01184
[VIEW IN KEGG] |
| EC |
3.2.1.15
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00040
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] map00040 [VIEW IN KEGG] map01100 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005576 [VIEW IN EMBL-EBI] GO:0005618 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0030312 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGATCATACTAATAATAAGCTTGTAGCTGTTTTCCTGATGTTATTCTCAAGCCTCTTGTTTATGGGAACATCAATGGCTGCTTACAACTATAATGTCATCAAGTTCGGTGCTAAACCGGACGGTCGAACCGACTCCACAAAAGCCTTCCTCGGCGCGTGGCAAGCGGCTTGCCGTTCAGCTGCAAGTGTCACTGTAACAGTGCCGAAAGGGAGCTTCTTGCTAAAACCGGTGGAGTTTCGTGGTCCGTGCCGTAGTAGAATCACGTTTCAGATTTATGGAACGATTGTAGCTCCTTCGGATTACCGTGGTTTGGGTAATTCCGGTTATTGGATCTTGTTCGTGAAAGTTAACCGGATCTCGATCAATGGAGGAACGTTAGATGCTAGAGGTGCTTCCTTTTGGGCTTGTCGAAAATCCGGAAAGAGTTGTCCTGCTGGAGCAAGATCCATGACGTTTAACTGGGCAAATGACGTCGTAGTGACCGGCTTGACGTCAATAAACAGCCAAGTAACACATTTAGTGATAAACAGCTGCAACAATGTAGTTGTCCGGAAAGTAAAGCTAGTAGCTCCAGACCAAAGTCCCAATACAGATGGCCTCCACGTCCAAGGTTCTGCTGGTGTTACCGTAAGCGATAGCACGTTTCAAACCGGAGATGATTGTATCTCTATTGGTCCGGGAACTCGTAACCTCTACATGTCTAAACTCAACTGCGGTCCAGGCCACGGAATCAGTATTGGGAGTCTAGGGAGAGATGCTAGGGAAGCTGGAGTACAGAATATAACGTTGGTAAACTCTGTTTTCTCGGGTTCGGATAATGGGGTTCGGATAAAGTCATGGGCTAGACAAAGCACAGGTTTTGTGAGGAACGTTTTGTTTCAAAACCTGGTCATGAAAAACGTTCAGAATCCGATCATTGTTGATCAGAACTATTGTCCAACTCATCAAGGTTGTCCTAAACAGGGTTCTGGGGTGAAGATTAGCCAGGTTGTGTATAGGAACATTCAAGGGACGTCACGAACGCAACAGGCTTTAAATTTTGACTGTAGTCGCAGTAATCCGTGCCAAGCGATTAGATTGCATGATATTAAGCTAACTTTCAACGGTCGGTCCGCTACTTCCACATGCAAGAATATTAAAGGAGTTAAGGCTGGTGTGGTTATGCCACAAGGTTGTCTTTGA |
| Protein: MDHTNNKLVAVFLMLFSSLLFMGTSMAAYNYNVIKFGAKPDGRTDSTKAFLGAWQAACRSAASVTVTVPKGSFLLKPVEFRGPCRSRITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISINGGTLDARGASFWACRKSGKSCPAGARSMTFNWANDVVVTGLTSINSQVTHLVINSCNNVVVRKVKLVAPDQSPNTDGLHVQGSAGVTVSDSTFQTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSLGRDAREAGVQNITLVNSVFSGSDNGVRIKSWARQSTGFVRNVLFQNLVMKNVQNPIIVDQNYCPTHQGCPKQGSGVKISQVVYRNIQGTSRTQQALNFDCSRSNPCQAIRLHDIKLTFNGRSATSTCKNIKGVKAGVVMPQGCL |